Package: WOTPLY 0.1.0
WOTPLY: Plot Connectivity Between Cells from Different Time Points
It shows the connections between selected clusters from the latest time point and the clusters from all the previous time points. The transition matrices between time point t and t+1 are obtained from Waddington-OT analysis <https://github.com/ScialdoneLab/WOTPLY>.
Authors:
WOTPLY_0.1.0.tar.gz
WOTPLY_0.1.0.zip(r-4.5)WOTPLY_0.1.0.zip(r-4.4)WOTPLY_0.1.0.zip(r-4.3)
WOTPLY_0.1.0.tgz(r-4.4-any)WOTPLY_0.1.0.tgz(r-4.3-any)
WOTPLY_0.1.0.tar.gz(r-4.5-noble)WOTPLY_0.1.0.tar.gz(r-4.4-noble)
WOTPLY_0.1.0.tgz(r-4.4-emscripten)WOTPLY_0.1.0.tgz(r-4.3-emscripten)
WOTPLY.pdf |WOTPLY.html✨
WOTPLY/json (API)
# Install 'WOTPLY' in R: |
install.packages('WOTPLY', repos = c('https://gabrielelubatti.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 2 years agofrom:4ee0b1ae45. Checks:OK: 1 NOTE: 6. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 14 2024 |
R-4.5-win | NOTE | Nov 14 2024 |
R-4.5-linux | NOTE | Nov 14 2024 |
R-4.4-win | NOTE | Nov 14 2024 |
R-4.4-mac | NOTE | Nov 14 2024 |
R-4.3-win | NOTE | Nov 14 2024 |
R-4.3-mac | NOTE | Nov 14 2024 |
Exports:convert_namesget_transition_matrixselect_top_weightsWOTPLY
Dependencies:clicodacolorspacecpp11crayondplyrfansifarverforcatsgenericsGGallyggplot2ggstatsgluegtablehmsisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnetworknlmepatchworkpillarpkgconfigplyrprettyunitsprogresspurrrR6RColorBrewerRcpprlangscalessnastatnet.commonstringistringrtibbletidyrtidyselectutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
Help page | Topics |
---|---|
convert_names | convert_names |
get_transition_matrix | get_transition_matrix |
select_top_weights | select_top_weights |
WOTPLY | WOTPLY |