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MitoHEAR - Quantification of Mitochondrial DNA Heteroplasmy

R package that allows the estimation and downstream statistical analysis of the mitochondrial DNA Heteroplasmy calculated from single-cell datasets.

Last updated

software

2.85 score 14 scripts 197 downloads

SCOPRO - Score Projection Between in 'Vivo' and in 'Vitro' Datasets

Assigns a score projection from 0 to 1 between a given in 'vivo' stage and each single cluster from an in 'vitro' dataset. The score is assigned based on the the fraction of specific markers of the in 'vivo' stage that are conserved in the in 'vitro' clusters <https://github.com/ScialdoneLab>.

Last updated

software

2.70 score 3 scripts 159 downloads

CIARA - Cluster Independent Algorithm for Rare Cell Types Identification

Identification of markers of rare cell types by looking at genes whose expression is confined in small regions of the expression space <https://github.com/ScialdoneLab>.

Last updated

software

2.70 score 7 scripts 264 downloads

WOTPLY - Plot Connectivity Between Cells from Different Time Points

It shows the connections between selected clusters from the latest time point and the clusters from all the previous time points. The transition matrices between time point t and t+1 are obtained from Waddington-OT analysis <https://github.com/ScialdoneLab/WOTPLY>.

Last updated

software

2.00 score 4 scripts 210 downloads