Package: SCOPRO 0.1.0

SCOPRO: Score Projection Between in 'Vivo' and in 'Vitro' Datasets

Assigns a score projection from 0 to 1 between a given in 'vivo' stage and each single cluster from an in 'vitro' dataset. The score is assigned based on the the fraction of specific markers of the in 'vivo' stage that are conserved in the in 'vitro' clusters <https://github.com/ScialdoneLab>.

Authors:Gabriele Lubatti

SCOPRO_0.1.0.tar.gz
SCOPRO_0.1.0.zip(r-4.5)SCOPRO_0.1.0.zip(r-4.4)SCOPRO_0.1.0.zip(r-4.3)
SCOPRO_0.1.0.tgz(r-4.4-any)SCOPRO_0.1.0.tgz(r-4.3-any)
SCOPRO_0.1.0.tar.gz(r-4.5-noble)SCOPRO_0.1.0.tar.gz(r-4.4-noble)
SCOPRO_0.1.0.tgz(r-4.4-emscripten)SCOPRO_0.1.0.tgz(r-4.3-emscripten)
SCOPRO.pdf |SCOPRO.html✨
SCOPRO/json (API)

Peer review:

Bug tracker:https://github.com/scialdonelab/scopro/issues

On CRAN:

software

7 exports 0.00 score 28 dependencies 3 scripts 187 downloads

Last updated 2 years agofrom:d1962de08f. Checks:OK: 7. Indexed: yes.

Exports:filter_in_vitroplot_scoreplot_score_genesSCOPROselect_common_genesselect_no_common_genesselect_top_markers

Dependencies:clicolorspacefansifarverggplot2gluegtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerrlangscalestibbleutf8vctrsviridisLitewithr